Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944779.1_cds_XP_016487479.1_78206
CDS Infomation

[gene=LOC107807586] [db_xref=GeneID:107807586] [protein=glucan endo-1,3-beta-glucosidase 6-like] [protein_id=XP_016487479.1] [location=join(2597..2946,3804..4908)] [gbkey=CDS]
Sequence

ATGCGATCTTTTGCTTTTTCTAAGTCATTTGGGGTATTATGTCTTGTAACCTTGTCAATG
GTTTCCATATTGCATTTAGTTTGTGGGATAGGTGCCAATTGGGGCACTCAATCAACACAC
AATTTGCCTCCTGAGATACTAGTCAAAATGCTAAAAGACAATGGGTTCCAAAAGGTTAAG
CTTTTTGATGCTGATTATGATACACTTAAGGCTTTGGGCAATTCTGACATTGAAGTTATG
GTTGGTATTCCTAATGACATGCTAACAACCTTGGGTAGCTTGAAAGCTGCTGAGAAATGG
GTTTCCAAGAATGTTTCTGTCCATCTTTCTGACAACAATGTGAACATCAGGTATGTTGCA
GTTGGAAATGAGCCTTTCTTAGAAACATATAATGGAAGTTACCTAAGAACAACTTTTCCT
GCTCTACAAAATATCCAAACTGCACTCGTAAAGGCTGGCCATGGTAATCAAGTGAAGGTC
ACCGTCCCCCTCAATGCCGATGTTTATGAGAGTGCCAGTAGCTTGCCATCCGGTGGTGAT
TTTAGAGCTGAGATCCATGACTTTGTGATCCAAATAGTCAAGTTCTTAAGCGATAATGGT
TGCCCTTTTACAATCAATATCTACCCATTCATAAGCCTCTATATAGATTCCAACTTTCCA
GTTGAATATGCGTTCTTTGATGGAAATGCAACACCTCTAAACGATGGCGGGACAATCTAC
ACCAACATGTTTGATGCAAATCATGACACTCTTGTGTGGGCTTTAAAGAAGAATGGGTTC
GGGAACTTACCTATTATAGTCGGAGAAATTGGTTGGCCCACAGATGGGGACCGCAATGCT
AACCTACAACTAGCGCAGCGTTTCAACCAAGGGTTCATGGCTCATATATCAGAAGGAAAA
GGCACCCCTATGAGGCCTGGGCCTGTTGATGCCTATCTGTTTAGTTTAATTGACGAGGAT
GCAAAAAGTATCCAACCTGGGAATTTCGAACGTCACTGGGGAATATTCGCCTATGATGGG
CGACCAAAATACTTACTTAACCTTGGCACTACAAATTCAGGATCTTTAGTTCCAGCTAGT
AATGTGAAGTATTTGGAAAGAAAATGGTGTGTGCTCAAGCCTGACGCTAAGCTTGATGAC
CCCCAGATTGCGCCTAGTGTGAGTTATGCTTGCGCGCGTGCTGATTGCACAAGCCTTGGT
TATGGGACATCATGTGGAGGCCTGGATGCGCGAGGAAATGTTTCATATGCATTCAACAGC
TACTATCAGATAAACGATCAGCTCGACGATGCCTGCAAGTTCTCAGGGCTTGGGACAATC
ACAAAGTCGGATCCATCTACGCCAAGTTGTAAGTTTGGGATCACGATCGAACCATACTAT
GGAGGTGCAGAACCAAAACTTGCCTATACACGGATTTTATTGTCTCTGATTCTCTTGCTA
TGGACAATTTTGTGA

Peptide Sequence

PEP ID

XP_016487479.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 6-like [Nicotiana tabacum]
Sequence

MRSFAFSKSFGVLCLVTLSMVSILHLVCGIGANWGTQSTHNLPPEILVKMLKDNGFQKVK
LFDADYDTLKALGNSDIEVMVGIPNDMLTTLGSLKAAEKWVSKNVSVHLSDNNVNIRYVA
VGNEPFLETYNGSYLRTTFPALQNIQTALVKAGHGNQVKVTVPLNADVYESASSLPSGGD
FRAEIHDFVIQIVKFLSDNGCPFTINIYPFISLYIDSNFPVEYAFFDGNATPLNDGGTIY
TNMFDANHDTLVWALKKNGFGNLPIIVGEIGWPTDGDRNANLQLAQRFNQGFMAHISEGK
GTPMRPGPVDAYLFSLIDEDAKSIQPGNFERHWGIFAYDGRPKYLLNLGTTNSGSLVPAS
NVKYLERKWCVLKPDAKLDDPQIAPSVSYACARADCTSLGYGTSCGGLDARGNVSYAFNS
YYQINDQLDDACKFSGLGTITKSDPSTPSCKFGITIEPYYGGAEPKLAYTRILLSLILLL
WTIL

Transcript Sequence

Gene sequence data has not been registered.